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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs10080232 chr6:102876859 A/G SEC63 chr6:108188960-108279393:- 0.76 6 4.65E-9 Box Plot
BLCA rs10085768 chr7:33079314 C/T FKBP9L chr7:55748767-55780945:- 0.28 6 4.49E-9 Box Plot
BLCA rs10088167 chr8:2504788 A/G OVOL2 chr20:17937623-18039832:- -0.45 -6.53 2.11E-10 Box Plot
BLCA rs10088468 chr8:24693844 A/G CHMP7 chr8:23101150-23119513:+ -0.77 -6.69 8.17E-11 Box Plot
BLCA rs10088468 chr8:24693844 A/G CNOT7 chr8:17082473-17104387:- -0.79 -6.58 1.58E-10 Box Plot
BLCA rs10088468 chr8:24693844 A/G DCTN6 chr8:30013813-30041156:+ -0.87 -7.3 1.63E-12 Box Plot
BLCA rs10088468 chr8:24693844 A/G HMBOX1 chr8:28747911-28922281:+ -0.75 -6.5 2.54E-10 Box Plot
BLCA rs10088468 chr8:24693844 A/G INTS9 chr8:28625178-28747759:- -0.82 -6.59 1.46E-10 Box Plot
BLCA rs10088468 chr8:24693844 A/G KIAA1967 chr8:22462257-22477981:+ -0.76 -6.2 1.49E-9 Box Plot
BLCA rs10088468 chr8:24693844 A/G LEPROTL1 chr8:29952914-30034724:+ -0.89 -7.14 4.83E-12 Box Plot
BLCA rs10088468 chr8:24693844 A/G PCM1 chr8:17780349-17887453:+ -0.72 -6.47 3.05E-10 Box Plot
BLCA rs10088468 chr8:24693844 A/G PPP2CB chr8:30631973-30671830:- -0.74 -6.78 4.66E-11 Box Plot
BLCA rs10088468 chr8:24693844 A/G R3HCC1 chr8:23127633-23153792:+ -0.73 -6.71 6.91E-11 Box Plot
BLCA rs10088468 chr8:24693844 A/G TMEM66 chr8:29920528-29939940:- -0.72 -6.71 7.0E-11 Box Plot
BLCA rs10088468 chr8:24693844 A/G VPS37A chr8:17104080-17159936:+ -0.71 -6.06 3.18E-9 Box Plot